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IDSCO5540 TypeCDS
From2628754 nt length3336
To2632089 aa length1111
Gene pI4.7
Definitionhypothetical protein M.W (Da)119857
NoteSC1C2.21c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2698 putative sensor-like histidine kinase12800.0e+00
sgrSGR_1939 putative sensor-like histidine kinase12440.0e+00
samSAM23877_5295 Membrane protein18300.0e+00
scabSCAB26741 putative sensor-like histidine kinase12980.0e+00
nfarnfa6670 putative histidine kinase2337.0e-62

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

NIT1Nitrate and nitrite sensing126-389153.11.4e-44

HAMP1HAMP domain409-49448.19.3e-13

HATPase_c1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase613-72036.45.8e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030300.1 MULTISPECIES: nitrate- and nitrite sensing domain-containing... 52690.0e+00
52510.0e+00
EFD66527.1 membrane protein [Streptomyces lividans TK24] 52200.0e+00
WP_203697624.1 nitrate- and nitrite sensing domain-containing protein [Stre... 51830.0e+00
WP_161270218.1 nitrate- and nitrite sensing domain-containing protein [Stre... 51360.0e+00
WP_030870125.1 MULTISPECIES: nitrate- and nitrite sensing domain-containing... 51260.0e+00
WP_193486937.1 nitrate- and nitrite sensing domain-containing protein [Stre... 51260.0e+00
WP_210984985.1 nitrate- and nitrite sensing domain-containing protein [Stre... 51260.0e+00
WP_189285109.1 nitrate- and nitrite sensing domain-containing protein [Stre... 51240.0e+00
WP_168715210.1 nitrate- and nitrite sensing domain-containing protein [Stre... 51230.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear