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IDSCO5552 TypeCDS
From2615693 nt length717
To2616409 aa length238
Gene pI11.75
Definitionputative transcriptional regulator M.W (Da)24975
NoteSC1C2.33c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2687 putative IclR-family transcriptional regulator3752.0e-105
sgrSGR_1930 putative IclR-family transcriptional regulator4545.0e-129
samSAM23877_5304 IclR family transcriptional regulator4592.0e-167
scabSCAB26621 putative IclR-family transcriptional regulator3552.0e-99
saceSACE_6145 transcriptional regulator, IclR family1624.0e-41
nfarnfa42130 putative transcriptional regulator1722.0e-44

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

IclR1Bacterial transcriptional regulator125-23160.81e-16

HTH_IclR1IclR helix-turn-helix domain10-5734.51.2e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030305.1 MULTISPECIES: IclR family transcriptional regulator NdgR [St... 11923.1e-165
WP_115744379.1 IclR family transcriptional regulator NdgR [Streptomyces sp.... 11905.9e-165
WP_003973443.1 MULTISPECIES: IclR family transcriptional regulator NdgR [St... 11871.4e-164
WP_210872917.1 IclR family transcriptional regulator [Streptomyces sp. RG38... 11871.9e-164
WP_121749358.1 MULTISPECIES: IclR family transcriptional regulator NdgR [un... 11853.3e-164
WP_161225517.1 IclR family transcriptional regulator NdgR [Streptomyces sp.... 11853.9e-164
WP_055421783.1 IclR family transcriptional regulator NdgR [Streptomyces pac... 11845.2e-164
WP_145883474.1 IclR family transcriptional regulator NdgR [Streptomyces sp.... 11845.2e-164
WP_046590279.1 IclR family transcriptional regulator NdgR [Streptomyces man... 11836.6e-164
WP_020270051.1 MULTISPECIES: IclR family transcriptional regulator NdgR [St... 11837.1e-164

PSORT result

LocalizationCertaintyPSORT said
Not Clear