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IDSCO5573 TypeCDS
From2596594 nt length861
To2595734 aa length286
Gene pI9.67
Definitionformamidopyrimidine-DNA glycosylase M.W (Da)32511
NoteSC7A1.17 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2664 putative formamidopyrimidine-DNA glycosylase5108.0e-146
sgrSGR_1907 putative formamidopyrimidine-DNA glycosylase4746.0e-135
samSAM23877_5326 Formamidopyrimidine-DNA glycosylase5500.0e+00
scabSCAB26381 putative formamidopyrimidine-DNA glycosylase5261.0e-150
saceSACE_6099 formamidopyrimidine-DNA glycosylase3523.0e-98
nfarnfa41830 putative formamidopyrimidine-DNA glycosylase3084.0e-85

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Fapy_DNA_glyco1Formamidopyrimidine-DNA glycosylase N-terminal domain1-121114.92.7e-33

H2TH1Formamidopyrimidine-DNA glycosylase H2TH domain139-22681.23.6e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003973422.1 MULTISPECIES: bifunctional DNA-formamidopyrimidine glycosyla... 14080.0e+00
WP_106518818.1 MULTISPECIES: bifunctional DNA-formamidopyrimidine glycosyla... 14020.0e+00
WP_121714206.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 13980.0e+00
WP_109036093.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 13840.0e+00
MYS74448.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or... 13780.0e+00
WP_164383103.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 13750.0e+00
WP_087789427.1 MULTISPECIES: bifunctional DNA-formamidopyrimidine glycosyla... 13710.0e+00
WP_007444895.1 MULTISPECIES: bifunctional DNA-formamidopyrimidine glycosyla... 13690.0e+00
WP_159330371.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 13690.0e+00
WP_061442353.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 13690.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear