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IDSCO5577 TypeCDS
From2592674 nt length3561
To2589114 aa length1186
Gene pI5.18
Definitionputative chromosome associated protein M.W (Da)128693
NoteSC7A1.21 AseI frg.B
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2658 putative chromosome segregation protein14630.0e+00
sgrSGR_1901 putative chromosome segregation protein16490.0e+00
samSAM23877_5332 Chromosome partition protein Smc19110.0e+00
scabSCAB26331 putative chromosome segregation protein17610.0e+00
saceSACE_6071 chromosome segregation ATPase8700.0e+00
nfarnfa41670 putative chromosome segregation protein8150.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SMC_N1RecF/RecN/SMC N terminal domain3-1176240.21.5e-71

SMC_hinge1SMC proteins Flexible Hinge Domain512-62280.41.1e-22

AAA_212AAA domain, putative AbiEii toxin, Type IV TA system26-83, 982-115564.21.6e-17

AAA_231AAA domain6-23954.61.8e-14

AAA_151AAA ATPase domain1-4948.77.6e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030315.1 MULTISPECIES: chromosome segregation protein SMC [Streptomyc... 39620.0e+00
EFD66487.1 chromosome segregation protein SMC [Streptomyces lividans TK24] 39560.0e+00
WP_202493698.1 MULTISPECIES: chromosome segregation protein SMC [Streptomyc... 39480.0e+00
WP_189285106.1 MULTISPECIES: chromosome segregation protein SMC [Streptomyc... 39030.0e+00
WP_093457068.1 MULTISPECIES: chromosome segregation protein SMC [Streptomyc... 38990.0e+00
WP_030870158.1 MULTISPECIES: chromosome segregation protein SMC [Streptomyc... 38940.0e+00
WP_109036087.1 chromosome segregation protein SMC [Streptomyces rubrogriseu... 38760.0e+00
WP_115744399.1 chromosome segregation protein SMC [Streptomyces sp. CB09001... 38530.0e+00
WP_121702584.1 chromosome segregation protein SMC [Streptomyces sp. E5N298] 38220.0e+00
WP_076976506.1 chromosome segregation protein SMC [Streptomyces sp. M1013] ... 38200.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear