-- | --

IDSCO5622 TypeCDS
From2545494 nt length558
To2544937 aa length185
Gene pI5.12
Definitionputative transcriptional regulator M.W (Da)19617
NoteSC2E1.39 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2629 putative TetR-family transcriptional regulator2376.0e-64
sgrSGR_1865 putative TetR-family transcriptional regulator3044.0e-84
samSAM23877_5362 Transcriptional regulator3432.0e-123
scabSCAB26041 putative TetR-family transcriptional regulator3152.0e-87

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TetR_N1Bacterial regulatory proteins, tetR family12-5848.74.4e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003973388.1 MULTISPECIES: TetR/AcrR family transcriptional regulator [St... 8393.0e-113
WP_121713538.1 TetR/AcrR family transcriptional regulator [Streptomyces sp.... 8351.5e-112
AIJ13088.2 transcriptional regulator [Streptomyces lividans TK24] >gb 8351.9e-112
WP_121749406.1 TetR/AcrR family transcriptional regulator [Streptomyces sp.... 8306.5e-112
WP_109036048.1 TetR/AcrR family transcriptional regulator [Streptomyces rub... 8291.1e-111
WP_115744420.1 TetR/AcrR family transcriptional regulator [Streptomyces sp.... 8291.2e-111
WP_159329367.1 MULTISPECIES: TetR/AcrR family transcriptional regulator [St... 8281.6e-111
WP_226027630.1 TetR/AcrR family transcriptional regulator [Streptomyces hyd... 8272.4e-111
MYS69026.1 TetR family transcriptional regulator [Streptomyces sp. SID5926] 8254.3e-111
WP_087807010.1 TetR/AcrR family transcriptional regulator [Streptomyces sp.... 8239.1e-111

PSORT result

LocalizationCertaintyPSORT said
Not Clear