-- | --

IDSCO5647 TypeCDS
From2522041 nt length1662
To2520380 aa length553
Gene pI11.62
DefinitionABC transporter integral membrane protein M.W (Da)59054
NoteSC6A9.20c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2619 putative ABC transporter permease protein7580.0e+00
sgrSGR_1856 putative ABC transporter permease protein7450.0e+00
samSAM23877_5376 ABC transporter integral membrane protein9060.0e+00
scabSCAB25931 putative ABC transporter permease protein8210.0e+00
saceSACE_0982 ABC transporter integral membrane protein3473.0e-96

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_12Binding-protein-dependent transport system inner membrane component87-272, 363-53985.04.7e-24

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU45167.1 ABC transporter permease subunit [Streptomyces sp. SID7813] >gb 18390.0e+00
WP_003973378.1 MULTISPECIES: iron ABC transporter permease [Streptomyces] >... 18330.0e+00
WP_193487169.1 iron ABC transporter permease [Streptomyces anthocyanicus] 18320.0e+00
WP_193783359.1 iron ABC transporter permease [Streptomyces sp. E5N91] 18300.0e+00
WP_210974459.1 iron ABC transporter permease [Streptomyces sp. RM72] >lcl 17920.0e+00
WP_171987425.1 MULTISPECIES: iron ABC transporter permease [unclassified St... 17910.0e+00
GHC31892.1 iron ABC transporter permease [Streptomyces anthocyanicus] 17850.0e+00
AIJ13078.1 ABC transporter integral membrane protein [Streptomyces lividans ... 17840.0e+00
MYS53014.1 ABC transporter permease subunit [Streptomyces sp. SID6013] 17830.0e+00
WP_159329366.1 iron ABC transporter permease [Streptomyces tendae] 17790.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear