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IDSCO5667 TypeCDS
From2501018 nt length1200
To2499819 aa length399
Gene pI5.2
Definitionputative ABC-transporter polyamine-binding lipop rotein M.W (Da)43869
NoteSC8B7.11c AseI frg.B
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2591 putative polyamine ABC transporter solute-binding protein6590.0e+00
sgrSGR_1837 putative polyamine ABC transporter substrate-binding protein6214.0e-179
samSAM23877_5393 Putrescine ABC transporter putrescine-binding protein PotF7160.0e+00
scabSCAB25761 putative polyamine ABC transporter substrate-binding protein6610.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SBP_bac_81Bacterial extracellular solute-binding protein83-35899.03.9e-28

SBP_bac_61Bacterial extracellular solute-binding protein122-36981.75.1e-23

SBP_bac_11Bacterial extracellular solute-binding protein82-33267.22.2e-18

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_007444968.1 MULTISPECIES: spermidine/putrescine ABC transporter substrat... 19350.0e+00
WP_164246355.1 spermidine/putrescine ABC transporter substrate-binding prot... 19350.0e+00
WP_003973358.1 MULTISPECIES: spermidine/putrescine ABC transporter substrat... 19350.0e+00
CAA20222.1 putative ABC-transporter polyamine-binding lipoprotein [Streptom... 19330.0e+00
WP_087806988.1 spermidine/putrescine ABC transporter substrate-binding prot... 19300.0e+00
WP_121710214.1 spermidine/putrescine ABC transporter substrate-binding prot... 19290.0e+00
WP_115744443.1 spermidine/putrescine ABC transporter substrate-binding prot... 19280.0e+00
WP_164383067.1 MULTISPECIES: spermidine/putrescine ABC transporter substrat... 19270.0e+00
MYS73618.1 extracellular solute-binding protein [Streptomyces sp. SID5926] 19250.0e+00
WP_164272058.1 spermidine/putrescine ABC transporter substrate-binding prot... 19210.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear