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IDSCO5688 TypeCDS
From2473090 nt length972
To2472119 aa length323
Gene pI10
Definitionputative transport system integral membrane protein M.W (Da)34720
NoteSC5H4.12 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2575 putative multiple sugar ABC transporter permease protein4661.0e-132
samSAM23877_5409 putative ABC transporter permease protein YtcP5610.0e+00
scabSCAB25601 putative multiple sugar ABC transporter permease protein5354.0e-153

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component126-31646.92.3e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
AIJ13037.1 transport system integral membrane protein [Streptomyces lividans... 13640.0e+00
WP_093457089.1 MULTISPECIES: carbohydrate ABC transporter permease [unclass... 13600.0e+00
WP_109035954.1 carbohydrate ABC transporter permease [Streptomyces rubrogri... 13550.0e+00
MYS73944.1 ABC transporter permease subunit [Streptomyces sp. SID5926] 13530.0e+00
MYU45208.1 ABC transporter permease subunit [Streptomyces sp. SID7813] >gb 13510.0e+00
WP_159329303.1 carbohydrate ABC transporter permease [Streptomyces tendae] 13260.0e+00
OWA10413.1 ABC transporter permease [Streptomyces sp. CS113] 13240.0e+00
WP_076976556.1 carbohydrate ABC transporter permease [Streptomyces sp. M101... 13220.0e+00
WP_115744460.1 carbohydrate ABC transporter permease [Streptomyces sp. CB09... 13220.0e+00
WP_189749083.1 carbohydrate ABC transporter permease [Streptomyces tendae] ... 13190.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear