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IDSCO5703 TypeCDS
From2453170 nt length534
To2452637 aa length177
Gene pI4.52
Definitionhypothetical protein M.W (Da)19769
NoteSC5H4.27 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2554 hypothetical protein2213.0e-59
sgrSGR_1814 conserved hypothetical protein2276.0e-61
samSAM23877_5424 Ribosome maturation factor RimP3002.0e-106
scabSCAB25381 hypothetical protein2707.0e-74
saceSACE_5928 protein of unknown function DUF150954.0e-21

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF1501Putative ribosome maturation factor RimP12-151122.79e-36

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003973323.1 MULTISPECIES: ribosome maturation factor RimP [Streptomyces]... 7974.2e-107
WP_121710045.1 ribosome maturation factor RimP [Streptomyces sp. E5N91] 7852.8e-105
WP_109035927.1 ribosome maturation factor RimP [Streptomyces rubrogriseus] ... 7852.9e-105
MYS76539.1 ribosome maturation factor RimP [Streptomyces sp. SID5926] 7837.1e-105
WP_161378817.1 MULTISPECIES: ribosome maturation factor RimP [Streptomyces]... 7636.8e-102
WP_127896715.1 ribosome maturation factor RimP [Streptomyces sp. S10(2018)] 7567.5e-101
WP_159330422.1 ribosome maturation factor RimP [Streptomyces tendae] 7541.7e-100
WP_165684684.1 ribosome maturation factor RimP [Streptomyces sp. KO7888] >g... 7532.4e-100
WP_108990266.1 ribosome maturation factor RimP [Streptomyces coelicoflavus] 7491.0e-99
KPC80539.1 ribosome maturation protein RimP [Streptomyces sp. NRRL WC-3753] 7491.0e-99

PSORT result

LocalizationCertaintyPSORT said
Not Clear