-- | --

IDSCO5704 TypeCDS
From2452634 nt length1023
To2451612 aa length340
Gene pI5.2
Definitionputative transcriptional termination/antitermination factor M.W (Da)36856
NoteSC5H4.28 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2553 putative transcriptional termination/antitermination factor5784.0e-166
sgrSGR_1813 putative transcriptional termination/antitermination factor5652.0e-162
samSAM23877_5425 Transcription termination/antitermination protein NusA6550.0e+00
scabSCAB25371 putative transcriptional termination/antitermination factor6350.0e+00
saceSACE_5927 putative transcriptional termination/antitermination factor3871.0e-108
nfarnfa40680 putative transcriptional termination/antitermination factor3752.0e-105

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

KH_51NusA-like KH domain210-27892.31.3e-26

NusA_N2NusA N-terminal domain6-61, 65-10373.81.3e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030401.1 MULTISPECIES: transcription termination factor NusA [Strepto... 17560.0e+00
WP_003973322.1 MULTISPECIES: transcription termination factor NusA [Strepto... 17490.0e+00
WP_202493717.1 MULTISPECIES: transcription termination factor NusA [Strepto... 17340.0e+00
WP_030188768.1 transcription termination factor NusA [Streptomyces violaceo... 17280.0e+00
WP_076976570.1 MULTISPECIES: transcription termination factor NusA [unclass... 17230.0e+00
WP_115744475.1 transcription termination factor NusA [Streptomyces sp. CB09... 17230.0e+00
WP_104636600.1 transcription termination factor NusA [Streptomyces sp. MH60... 17220.0e+00
WP_133889398.1 transcription termination factor NusA [Streptomyces sp. BK20... 17150.0e+00
WP_189749059.1 transcription termination factor NusA [Streptomyces tendae] ... 17130.0e+00
WP_159330420.1 transcription termination factor NusA [Streptomyces tendae] 17070.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear