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IDSCO5751 TypeCDS
From2378318 nt length864
To2377455 aa length287
Gene pI4.88
Definitionhypothetical protein M.W (Da)30092
NoteSC7C7.06 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2509 putative membrane protein3502.0e-97
sgrSGR_1770 conserved hypothetical protein3592.0e-100
samSAM23877_5455 putative membrane protein4491.0e-161
scabSCAB25111 hypothetical protein3786.0e-106

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_251Helix-turn-helix domain35-9671.43.7e-20

DUF41151Domain of unknown function (DUF4115)208-27857.88.6e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003973273.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 11512.3e-157
WP_115744511.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11382.0e-155
WP_109029978.1 helix-turn-helix domain-containing protein [Streptomyces rub... 11363.6e-155
WP_127895465.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 11095.3e-151
WP_104631030.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11086.7e-151
WP_087806921.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11079.8e-151
WP_189749754.1 helix-turn-helix domain-containing protein [Streptomyces ten... 11033.8e-150
WP_226030035.1 DUF4115 domain-containing protein [Streptomyces hyderabadens... 11034.5e-150
WP_108990700.1 helix-turn-helix domain-containing protein [Streptomyces coe... 10948.9e-149
WP_030184289.1 helix-turn-helix domain-containing protein [Streptomyces vio... 10921.8e-148

PSORT result

LocalizationCertaintyPSORT said
Not Clear