| ID | SCO5769
| Type | CDS
|
| From | 2360854
| nt length | 1125
|
| To | 2359730
| aa length | 374
|
| Gene | recA
| pI | 6.19
|
| Definition | RecA protein
| M.W (Da) | 39582
|
| Note |
| AseI frg. | B
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_2492 putative recombination protein RecA | 617 | 6.0e-178
|
| sgr | SGR_1745 putative RecA protein | 650 | 0.0e+00
|
| sam | SAM23877_5473 DNA strand exchange and recombination protein with protease and nuclease activity | 675 | 0.0e+00
|
| scab | SCAB24951 putative recombination protein RecA | 675 | 0.0e+00
|
| sace | SACE_1736 DNA recombination/repair | 521 | 3.0e-149
|
| nfar | nfa38430 putative RecA protein | 517 | 6.0e-148
|
*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| RecA | 1 | recA bacterial DNA recombination protein | 8-269 | 479.4 | 2.5e-144
|
| Rad51 | 1 | Rad51 | 38-241 | 41.4 | 8.8e-11
|
| ATPase | 1 | KaiC | 40-230 | 41.4 | 9.2e-11
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|