| ID | SCO5820 | Type | CDS |
| From | 2299843 | nt length | 1536 |
| To | 2298308 | aa length | 511 |
| Gene | hrdB | pI | 5.93 |
| Definition | major vegetative sigma factor rpoD | M.W (Da) | 55903 |
| Note | SC5B8.10 | AseI frg. | B |
| SignalP v.4.0 | Non-secretory protein | plot | Category |
| Bacteria* | Reciprocally best hit to | Score | E-value |
| avm | SAVERM_2444 RNA polymerase major sigma factor, sigma-70 family | 733 | 0.0e+00 |
| sgr | SGR_1701 RNA polymerase principal sigma factor hrdB | 825 | 0.0e+00 |
| sam | SAM23877_5527 RNA polymerase principal sigma factor HrdB | 909 | 0.0e+00 |
| scab | SCAB24441 RNA polymerase major sigma factor, sigma-70 family | 864 | 0.0e+00 |
| sace | SACE_1801 RNA polymerase major sigma factor | 438 | 6.0e-124 |
| nfar | nfa37590 putative principal sigma factor | 444 | 1.0e-125 |
| Model | No. | Description | Position (aa) | Score | E-value | |
| Sigma70_r3 | 1 | Sigma-70 region 3 | 357-433 | 99.1 | 1e-28 | |
| Sigma70_r2 | 1 | Sigma-70 region 2 | 278-347 | 78.9 | 1.7e-22 | |
| Sigma70_r4 | 1 | Sigma-70, region 4 | 446-499 | 69.6 | 1.1e-19 | |
| Sigma70_r1_2 | 1 | Sigma-70 factor, region 1.2 | 213-246 | 62.8 | 2e-17 |
| ID | Description | Score | E-value |
| WP_003973202.1 | MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >sp... | 1955 | 0.0e+00 |
| WP_030865045.1 | MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >gb... | 1955 | 0.0e+00 |
| WP_193485551.1 | RNA polymerase sigma factor [Streptomyces anthocyanicus] >db... | 1954 | 0.0e+00 |
| WP_109030014.1 | RNA polymerase sigma factor [Streptomyces rubrogriseus] >gb | 1952 | 0.0e+00 |
| NEC70767.1 | RNA polymerase sigma factor [Streptomyces rochei] | 1947 | 0.0e+00 |
| EOY50795.1 | RNA polymerase sigma factor RpoD [Streptomyces lividans 1326] | 1946 | 0.0e+00 |
| WP_136236265.1 | RNA polymerase sigma factor [Streptomyces sp. SS52] >gb | 1946 | 0.0e+00 |
| WP_031015440.1 | MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >gb... | 1946 | 0.0e+00 |
| GGY95564.1 | RNA polymerase principal sigma factor HrdB [Streptomyces geysiri... | 1939 | 0.0e+00 |
| WP_062133726.1 | RNA polymerase sigma factor [Streptomyces sp. CC71] >gb | 1936 | 0.0e+00 |
| Localization | Certainty | PSORT said |
| Not Clear |