-- | --

IDSCO5835 TypeCDS
From2282169 nt length1089
To2281081 aa length362
Gene pI4.62
Definitionhypothetical protein M.W (Da)38492
NoteSC9B10.02 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2424 putative cobalamin synthesis protein5192.0e-148
sgrSGR_1690 putative ATP/GTP-binding protein4219.0e-119
samSAM23877_5540 ATP/GTP-binding protein6140.0e+00
scabSCAB24301 putative cobalamin synthesis protein5348.0e-153
saceSACE_3297 cobalamin synthesis protein3356.0e-93
nfarnfa43200 putative cobalamin synthesis protein2854.0e-78

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

cobW1CobW/HypB/UreG, nucleotide-binding domain11-171143.93.4e-42

CobW_C1Cobalamin synthesis protein cobW C-terminal domain233-33269.91.2e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030486.1 GTP-binding protein [Streptomyces coelicolor] >gb 17370.0e+00
WP_136207298.1 GTP-binding protein [Streptomyces sp. LRa12] >lcl 17370.0e+00
WP_030865020.1 MULTISPECIES: GTP-binding protein [Streptomyces] >gb 17270.0e+00
WP_210984838.1 GTP-binding protein [Streptomyces sp. RK76] >lcl 17200.0e+00
WP_189284480.1 GTP-binding protein [Streptomyces anthocyanicus] >dbj 17130.0e+00
WP_003973186.1 MULTISPECIES: GTP-binding protein [Streptomyces] >gb 17060.0e+00
WP_121716170.1 GTP-binding protein [Streptomyces sp. E5N91] 16930.0e+00
WP_115744586.1 GTP-binding protein [Streptomyces sp. CB09001] >gb 16880.0e+00
WP_109029906.1 GTP-binding protein [Streptomyces rubrogriseus] 16660.0e+00
NEC32607.1 GTP-binding protein [Streptomyces rubrogriseus] 16650.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear