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IDSCO5921 TypeCDS
From2177688 nt length204
To2177891 aa length67
GenescoF4 pI4.54
DefinitionscoF4 cold-shock domain protein M.W (Da)7115
NoteSC10A5.26c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4154 putative cold shock protein1121.0e-26
samSAM23877_7554 cold shock protein-like protein1364.0e-45

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-65100.23.8e-29

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003973099.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3423.1e-41
WP_028810498.1 MULTISPECIES: cold-shock protein [Streptomyces] >lcl 3406.5e-41
WP_042169227.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3399.9e-41
WP_145830460.1 cold-shock protein [Streptomyces sp. T12] >lcl 3399.9e-41
WP_030212013.1 cold-shock protein [Streptomyces sp. NRRL WC-3626] 3399.9e-41
WP_030349225.1 cold-shock protein [Streptomyces sp. NRRL S-1022] 3381.2e-40
WP_205043802.1 MULTISPECIES: cold-shock protein [Streptomyces] >lcl 3381.2e-40
WP_191850762.1 cold-shock protein [Streptomyces anthocyanicus] >dbj 3381.3e-40
WP_023586105.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3381.3e-40
WP_023586116.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3371.7e-40

PSORT result

LocalizationCertaintyPSORT said
Not Clear