-- | --

IDSCO6008 TypeCDS
From2079266 nt length1212
To2078055 aa length403
Gene pI5.89
Definitionprobable transcriptional repressor protein M.W (Da)40961
NoteSC7B7.05 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2248 putative ROK-family transcriptional regulator6430.0e+00
sgrSGR_1499 putative ROK-family transcriptional regulator6970.0e+00
samSAM23877_5725 ROK family transcriptional regulator7560.0e+00
scabSCAB21031 putative ROK-family transcriptional regulator7320.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ROK1ROK family82-378206.74.8e-61

MarR_21MarR family17-6835.18.2e-09

HTH_241Winged helix-turn-helix DNA-binding17-5728.85.8e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003972914.1 MULTISPECIES: ROK family transcriptional regulator [Streptom... 20170.0e+00
WP_159329005.1 ROK family transcriptional regulator [Streptomyces tendae] >... 20050.0e+00
WP_109029764.1 ROK family transcriptional regulator [Streptomyces rubrogris... 20020.0e+00
WP_127892578.1 ROK family transcriptional regulator [Streptomyces sp. S10(2... 19990.0e+00
WP_087806657.1 ROK family transcriptional regulator [Streptomyces sp. CS113... 19990.0e+00
WP_226025431.1 ROK family transcriptional regulator [Streptomyces hyderabad... 19960.0e+00
WP_161379988.1 MULTISPECIES: ROK family transcriptional regulator [unclassi... 19940.0e+00
WP_167308514.1 MULTISPECIES: ROK family transcriptional regulator [Streptom... 19920.0e+00
WP_059298200.1 MULTISPECIES: ROK family transcriptional regulator [Streptom... 19910.0e+00
WP_189231966.1 MULTISPECIES: ROK family transcriptional regulator [Streptom... 19900.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear