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IDSCO6028 TypeCDS
From2049616 nt length1185
To2050800 aa length394
Gene pI6.69
Definitionhypothetical protein M.W (Da)42443
NoteSC1C3.16c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2231 putative ribonuclease D5661.0e-162
sgrSGR_1476 putative ribonuclease D5302.0e-151
samSAM23877_5746 Ribonuclease D7100.0e+00
scabSCAB20891 putative ribonuclease D6450.0e+00
saceSACE_1832 putative ribonuclease D (partial match)3162.0e-87
nfarnfa37400 putative RNase D3331.0e-92

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_pol_A_exo113'-5' exonuclease12-175121.43e-35

HRDC1HRDC domain217-27452.82.5e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003972895.1 MULTISPECIES: ribonuclease D [Streptomyces] >gb 15840.0e+00
KKD17213.1 3'-5' exonuclease [Streptomyces sp. WM6391] >gb 15840.0e+00
GHA77049.1 3'-5' exonuc... 15830.0e+00
WP_202493790.1 MULTISPECIES: ribonuclease D [Streptomyces] 15830.0e+00
WP_168715225.1 MULTISPECIES: ribonuclease D [Streptomyces] >lcl 15820.0e+00
WP_193783241.1 ribonuclease D [Streptomyces sp. E5N91] 15750.0e+00
WP_167469326.1 ribonuclease D [Streptomyces rubrogriseus] 15730.0e+00
WP_162833383.1 ribonuclease D [Streptomyces sp. CB09001] 15670.0e+00
AXL93511.1 ribonuclease D [Streptomyces sp. CB09001] 15660.0e+00
WP_030179316.1 ribonuclease D [Streptomyces violaceorubidus] 15540.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear