-- | --

IDSCO6063 TypeCDS
From2012053 nt length714
To2011340 aa length237
Gene pI9.09
Definitionprobable ABC transport permease M.W (Da)25239
NoteSC9B1.10 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2184 putative ABC transporter permease3161.0e-87
sgrSGR_513 putative ABC transporter permease protein1287.0e-31
samSAM23877_5778 putative ABC transport permease3826.0e-137
scabSCAB81791 putative ABC transporter permease protein1747.0e-45
saceSACE_6411 amino acid ABC transporter, permease protein954.0e-21

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component31-20971.95.1e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_121710008.1 ABC transporter permease subunit [Streptomyces sp. E5N91] 8271.2e-109
WP_003972858.1 MULTISPECIES: ABC transporter permease subunit [Streptomyces... 8261.7e-109
MYS68927.1 ABC transporter permease subunit [Streptomyces sp. SID5926] 8052.9e-106
NEC31703.1 ABC transporter permease subunit [Streptomyces rubrogriseus] 8044.0e-106
WP_109029715.1 ABC transporter permease subunit [Streptomyces rubrogriseus] 8044.6e-106
WP_195888199.1 ABC transporter permease subunit [Streptomyces olivaceus] >l... 8001.3e-105
WP_031043013.1 MULTISPECIES: ABC transporter permease subunit [Streptomyces... 7991.7e-105
WP_037762840.1 MULTISPECIES: ABC transporter permease subunit [Streptomyces... 7964.8e-105
WP_219186196.1 ABC transporter permease subunit [Streptomyces sp. AC542_RSS... 7965.8e-105
QNF65274.1 ABC transporter permease [Streptomyces sp. Ae707_A7] 7941.0e-104

PSORT result

LocalizationCertaintyPSORT said
Not Clear