-- | --

IDSCO6086 TypeCDS
From1982962 nt length948
To1982015 aa length315
Gene pI8.7
Definitionputative transport system integral membrane protein M.W (Da)33967
NoteSCBAC1A6.10 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2145 putative ABC transporter permease protein4616.0e-131
sgrSGR_1415 putative ABC transporter permease protein4761.0e-135
samSAM23877_5804 putative transport system integral membrane protein5110.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component104-30289.71.8e-25

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYS78137.1 ABC transporter permease subunit [Streptomyces sp. SID5926] 11562.7e-157
WP_011030644.1 MULTISPECIES: sugar ABC transporter permease [Streptomyces] ... 11554.0e-157
WP_109029696.1 sugar ABC transporter permease [Streptomyces rubrogriseus] >... 11554.7e-157
WP_115744833.1 sugar ABC transporter permease [Streptomyces sp. CB09001] >g... 11546.0e-157
WP_030864250.1 MULTISPECIES: sugar ABC transporter permease [Streptomyces] ... 11537.9e-157
WP_203696578.1 sugar ABC transporter permease [Streptomyces rubrogriseus] 11502.3e-156
WP_191850522.1 sugar ABC transporter permease [Streptomyces anthocyanicus] ... 11502.6e-156
WP_134651400.1 MULTISPECIES: sugar ABC transporter permease [unclassified S... 11493.0e-156
WP_212731575.1 ABC transporter permease subunit [Streptomyces sp. V17-9] >g... 11484.6e-156
EOY51186.1 N-Acetyl-D-glucosamine ABC transport system, permease protein [St... 11446.2e-156

PSORT result

LocalizationCertaintyPSORT said
Not Clear