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IDSCO6087 TypeCDS
From1982018 nt length834
To1981185 aa length277
Gene pI10.81
Definitionputative transport system integral membrane protein M.W (Da)29737
NoteSCBAC1A6.11 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorymiscellaneous

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2144 putative ABC transporter permease protein3684.0e-103
sgrSGR_1414 putative ABC transporter permease protein4271.0e-120
samSAM23877_5805 conserved membrane protein of unknown function4817.0e-175
saceSACE_1047 ABC sugar transporter, permease component1524.0e-38

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component89-26477.68.8e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030645.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 9963.5e-134
WP_191850524.1 carbohydrate ABC transporter permease [Streptomyces anthocya... 9955.4e-134
WP_159328190.1 carbohydrate ABC transporter permease [Streptomyces tendae] 9921.4e-133
WP_121710073.1 carbohydrate ABC transporter permease [Streptomyces sp. E5N9... 9912.4e-133
WP_030864252.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 9912.6e-133
MZG19054.1 ABC transporter permease subunit [Streptomyces sp. SID5914] 9861.2e-132
NEV91171.1 carbohydrate ABC transporter permease [Streptomyces tendae] 9861.2e-132
WP_121703548.1 carbohydrate ABC transporter permease [Streptomyces sp. E5N2... 9861.3e-132
WP_115744834.1 carbohydrate ABC transporter permease [Streptomyces sp. CB09... 9861.5e-132
WP_003972833.1 carbohydrate ABC transporter permease [Streptomyces lividans... 9861.5e-132

PSORT result

LocalizationCertaintyPSORT said
Not Clear