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IDSCO6192 TypeCDS
From1868696 nt length1107
To1867590 aa length368
Gene pI10.27
Definitionhypothetical protein M.W (Da)40713
NoteSC2G5.13 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2035 hypothetical protein4984.0e-142
sgrSGR_1336 conserved hypothetical protein4541.0e-128
samSAM23877_5924 hypothetical protein6240.0e+00
scabSCAB18671 hypothetical protein5223.0e-149
saceSACE_0696 hypothetical protein2888.0e-79
nfarnfa50830 hypothetical protein1848.0e-48

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_421Winged helix DNA-binding domain39-351242.85.8e-72

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_106518872.1 MULTISPECIES: winged helix DNA-binding domain-containing pro... 15880.0e+00
REH24413.1 winged helix DNA-binding protein [Streptomyces sp. 2221.1] >dbj 15880.0e+00
WP_011030728.1 MULTISPECIES: winged helix DNA-binding domain-containing pro... 15870.0e+00
TYP12... 15860.0e+00
PSK44089.1 hypothetical protein B0E38_07732 [Streptomyces sp. 111WW2] 15860.0e+00
GGL41257.1 hypothetical protein GCM10010095_27650 [Streptomyces anthocyanic... 15840.0e+00
GHA60893.1 hypothetical protein GCM10010391_52780 [Streptomyces anthocyanic... 15840.0e+00
AIJ12450.1 hypothetical protein SLIV_07175 [Streptomyces lividans TK24] >gb 15840.0e+00
WP_189283733.1 MULTISPECIES: winged helix DNA-binding domain-containing pro... 15840.0e+00
WP_037667174.1 MULTISPECIES: winged helix DNA-binding domain-containing pro... 15830.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear