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IDSCO6239 TypeCDS
From1804233 nt length969
To1805201 aa length322
Gene pI5.15
Definitionputative sigma factor M.W (Da)35588
NoteSCAH10.04c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 228-9043.91.4e-11

Sigma70_r4_21Sigma-70, region 4141-19227.32e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030761.1 MULTISPECIES: RNA polymerase sigma factor SigJ [Streptomyces... 15890.0e+00
GHA61148.1 RNA polymerase sigma24 factor [Streptomyces anthocyanicus] 15880.0e+00
WP_189283715.1 RNA polymerase sigma factor SigJ [Streptomyces anthocyanicus... 15860.0e+00
WP_003972688.1 MULTISPECIES: RNA polymerase sigma factor SigJ [Streptomyces... 15830.0e+00
WP_037897362.1 RNA polymerase sigma factor SigJ [Streptomyces violaceoruber... 15820.0e+00
WP_093457284.1 MULTISPECIES: RNA polymerase sigma factor SigJ [unclassified... 15780.0e+00
WP_087811801.1 RNA polymerase sigma factor SigJ [Streptomyces sp. CS113] >g... 15750.0e+00
WP_063124384.1 RNA polymerase sigma factor SigJ [Streptomyces canus] 15710.0e+00
WP_161380591.1 MULTISPECIES: RNA polymerase sigma factor SigJ [Streptomyces... 15090.0e+00
WP_189702408.1 RNA polymerase sigma factor SigJ [Streptomyces chromofuscus]... 14290.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear