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IDSCO6246 TypeCDS
From1798039 nt length813
To1798851 aa length270
Gene pI5.73
Definitionputative transcriptional regulator M.W (Da)28391
NoteSCAH10.11c AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1997 putative IclR-family transcriptional regulator4193.0e-118
sgrSGR_1290 putative IclR-family transcriptional regulator4622.0e-131
samSAM23877_5970 DNA-binding transcriptional repressor5120.0e+00
scabSCAB18331 putative IclR-family transcriptional regulator4743.0e-135
saceSACE_6757 IclR-family transcriptional regulator3031.0e-83

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

IclR1Bacterial transcriptional regulator134-256108.42e-31

HTH_IclR1IclR helix-turn-helix domain21-7265.32.8e-18

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003972681.1 MULTISPECIES: allantoin degradation transcriptional regulato... 13160.0e+00
WP_030865363.1 MULTISPECIES: allantoin degradation transcriptional regulato... 13100.0e+00
WP_115744962.1 allantoin degradation transcriptional regulator AllR [Strept... 13020.0e+00
WP_059300394.1 MULTISPECIES: allantoin degradation transcriptional regulato... 12947.9e-180
WP_104634548.1 allantoin degradation transcriptional regulator AllR [Strept... 12931.3e-179
WP_076977015.1 allantoin degradation transcriptional regulator AllR [Strept... 12931.5e-179
WP_127892379.1 MULTISPECIES: allantoin degradation transcriptional regulato... 12896.8e-179
WP_133886151.1 allantoin degradation transcriptional regulator AllR [Strept... 12888.7e-179
WP_087806402.1 allantoin degradation transcriptional regulator AllR [Strept... 12861.8e-178
WP_226030309.1 helix-turn-helix domain-containing protein [Streptomyces hyd... 12852.6e-178

PSORT result

LocalizationCertaintyPSORT said
Not Clear