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IDSCO6256 TypeCDS
From1789204 nt length738
To1788467 aa length245
Gene pI6.52
Definitionputative transcriptional regulator M.W (Da)26564
NoteSCAH10.21 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1984 putative GntR-family transcriptional regulator3953.0e-111
sgrSGR_1276 putative GntR-family transcriptional regulator3852.0e-108
samSAM23877_5979 putative transcriptional regulator4701.0e-171
scabSCAB18221 putative GntR-family transcriptional regulator4222.0e-119
saceSACE_5191 GntR-family transcriptional regulator2586.0e-70

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

UTRA1UTRA domain99-235136.07.2e-40

GntR1Bacterial regulatory proteins, gntR family16-7861.63.7e-17

HTH_IclR1IclR helix-turn-helix domain43-7027.61.6e-06

HTH_241Winged helix-turn-helix DNA-binding43-6825.27.9e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030772.1 MULTISPECIES: myo-inositol degradation transcriptional regul... 12568.0e-175
WP_087811799.1 MULTISPECIES: myo-inositol degradation transcriptional regul... 12507.4e-174
WP_079021299.1 MULTISPECIES: myo-inositol degradation transcriptional regul... 12507.8e-174
GGL41742.1 transcriptional regulator [Streptomyces anthocyanicus] 12509.3e-174
NSL81285.1 myo-inositol degradation transcriptional regulator [Streptomyces ... 12491.0e-173
WP_202493838.1 MULTISPECIES: GntR family transcriptional regulator [Strepto... 12437.1e-173
EFD65736.1 transcriptional regulator [Streptomyces lividans TK24] >gb 12431.1e-172
EOY51351.1 Transcriptional regulator, GntR family [Streptomyces lividans 132... 12421.5e-172
WP_115746671.1 myo-inositol degradation transcriptional regulator [Streptom... 12375.6e-172
WP_189745018.1 myo-inositol degradation transcriptional regulator [Streptom... 12376.6e-172

PSORT result

LocalizationCertaintyPSORT said
Not Clear