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IDSCO6262 TypeCDS
From1783370 nt length2934
To1780437 aa length977
Gene pI6.12
Definitionputative helicase M.W (Da)103912
NoteSCAH10.27 AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1978 putative SNF2/RAD54 family helicase13680.0e+00
sgrSGR_5543 putative SNF2/RAD54 family helicase13210.0e+00
samSAM23877_5985 putative helicase16490.0e+00
scabSCAB18191 putative SNF2/RAD54 family helicase15150.0e+00
saceSACE_1609 probable helicase, Snf2/Rad54 family4664.0e-132
nfarnfa10310 putative helicase4395.0e-124

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SNF2_N1SNF2 family N-terminal domain531-786167.82.4e-49

DUF36701SNF2 Helicase protein340-468123.07e-36

Helicase_C1Helicase conserved C-terminal domain806-91759.14.3e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030777.1 MULTISPECIES: DEAD/DEAH box helicase [Streptomyces] >gb 41100.0e+00
WP_093457292.1 MULTISPECIES: DEAD/DEAH box helicase [unclassified Streptomy... 40950.0e+00
WP_038534270.1 MULTISPECIES: DEAD/DEAH box helicase [Streptomyces] >gb 40930.0e+00
WP_189283725.1 DEAD/DEAH box helicase [Streptomyces anthocyanicus] >dbj 40900.0e+00
WP_037666143.1 DEAD/DEAH box helicase [Streptomyces lividans] 40820.0e+00
WP_193485345.1 DEAD/DEAH box helicase [Streptomyces anthocyanicus] >dbj 40730.0e+00
WP_191850628.1 DEAD/DEAH box helicase [Streptomyces anthocyanicus] >dbj 40730.0e+00
WP_109029542.1 DEAD/DEAH box helicase [Streptomyces rubrogriseus] 40570.0e+00
EOY51357.1 Helicase, SNF2/RAD54 family [Streptomyces lividans 1326] 40560.0e+00
EFD65730.1 helicase [Streptomyces lividans TK24] 40540.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear