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IDSCO6518 TypeCDS
From1458617 nt length483
To1458135 aa length160
Gene pI8.83
Definitionputative transcriptional regulator M.W (Da)17323
NoteSC5C7.03 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3000 putative AraC-family transcriptional regulator1852.0e-48
sgrSGR_4771 putative AraC-family transcriptional regulator1999.0e-53
samSAM23877_6224 Transcriptional regulator2587.0e-91
scabSCAB29991 putative AraC-family transcriptional regulator2012.0e-53
saceSACE_3703 transcriptional regulator, AraC family1652.0e-42
nfarnfa43930 putative transcriptional regulator1673.0e-43

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain30-10978.14e-22

HTH_AraC1Bacterial regulatory helix-turn-helix proteins, AraC family72-10752.33.7e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030981.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 7181.6e-95
WP_202493877.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 7152.1e-95
WP_189283505.1 helix-turn-helix transcriptional regulator [Streptomyces ant... 7136.9e-95
WP_121713283.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 7129.7e-95
WP_016327755.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 7111.9e-94
EFD65526.1 transcriptional regulator [Streptomyces lividans TK24] 7082.8e-94
WP_115745165.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 7024.3e-93
WP_109028504.1 helix-turn-helix transcriptional regulator [Streptomyces rub... 6765.8e-89
NEC36119.1 helix-turn-helix transcriptional regulator [Streptomyces rubrogri... 6704.7e-88
WP_203696758.1 helix-turn-helix transcriptional regulator [Streptomyces rub... 6684.9e-88

PSORT result

LocalizationCertaintyPSORT said
Not Clear