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IDSCO6542 TypeCDS
From1432712 nt length1896
To1430817 aa length631
Gene pI6.14
Definitionputative secreted protein M.W (Da)67414
NoteSC5C7.27 AseI frg.A
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1857 putative secreted glycosyl hydrolase9520.0e+00
samSAM23877_6247 Rhamnogalacturonan endolyase YesW11250.0e+00
scabSCAB17041 putative secreted glycosyl hydrolase9710.0e+00

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_202493885.1 rhamnogalacturonan lyase [Streptomyces sp. SID7813] 28780.0e+00
WP_208328849.1 rhamnogalacturonan lyase [Streptomyces coelicolor] 28700.0e+00
WP_011030997.1 rhamnogalacturonan lyase [Streptomyces coelicolor] >gb 28690.0e+00
WP_093457363.1 rhamnogalacturonan lyase [Streptomyces sp. 2114.2] >emb 28630.0e+00
WP_003972437.1 rhamnogalacturonan lyase [Streptomyces sp. WM6391] >gb 28630.0e+00
WP_217284076.1 rhamnogalacturonan lyase [Streptomyces sp. 2221.1] 28620.0e+00
WP_207794538.1 MULTISPECIES: rhamnogalacturonan lyase [Streptomyces] >lcl 28600.0e+00
GGL37364.1 rhamnogalacturonan lyase [Streptomyces anthocyanicus] 28580.0e+00
WP_030863221.1 MULTISPECIES: rhamnogalacturonan lyase [Streptomyces] >gb 28570.0e+00
WP_220451614.1 rhamnogalacturonan lyase [Streptomyces anthocyanicus] 28550.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear