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IDSCO6555 TypeCDS
From1413129 nt length879
To1414007 aa length292
Gene pI9.9
DefinitionLysR-type transcriptional regulator M.W (Da)31961
NoteSC4B5.05c AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1845 putative LysR-family transcriptional regulator4483.0e-127
sgrSGR_1124 putative LysR-family transcriptional regulator4071.0e-114
samSAM23877_6255 LysR family transcriptional regulator5090.0e+00
scabSCAB16931 putative LysR-family transcriptional regulator4822.0e-137
nfarnfa30710 putative transcriptional regulator2278.0e-61

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain87-273115.51.9e-33

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family6-6373.21.1e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003972425.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12875.0e-178
WP_109028535.1 LysR family transcriptional regulator [Streptomyces rubrogri... 12842.0e-177
WP_121714339.1 LysR family transcriptional regulator [Streptomyces sp. E5N9... 12763.1e-176
WP_059300142.1 LysR family transcriptional regulator [Streptomyces canus] 12581.9e-173
WP_164274523.1 LysR family transcriptional regulator, partial [Streptomyces... 12524.5e-173
WP_226029937.1 LysR family transcriptional regulator [Streptomyces hyderaba... 12546.8e-173
WP_165288504.1 LysR family transcriptional regulator [Streptomyces sp. SID1... 12538.3e-173
WP_076977239.1 LysR family transcriptional regulator [Streptomyces sp. M101... 12539.6e-173
WP_104634069.1 LysR family transcriptional regulator [Streptomyces sp. MH60... 12511.7e-172
WP_115745199.1 LysR family transcriptional regulator [Streptomyces sp. CB09... 12502.4e-172

PSORT result

LocalizationCertaintyPSORT said
Not Clear