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IDSCO6704 TypeCDS
From1211508 nt length465
To1211044 aa length154
Gene pI9.97
Definitionputative transcriptional regulator M.W (Da)17004
NoteSC4C6.14 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1699 putative MarR-family transcriptional regulator2391.0e-64
samSAM23877_6358 hypothetical protein2831.0e-100
scabSCAB13621 putative MarR-family transcriptional regulator2583.0e-70

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_271Winged helix DNA-binding domain34-9943.92.2e-11

MarR_21MarR family34-9036.43.3e-09

MarR1MarR family34-8934.01.9e-08

TrmB1Sugar-specific transcriptional regulator TrmB40-8427.02.8e-06

HTH_241Winged helix-turn-helix DNA-binding38-7924.91e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
GGL74114.1 transcriptional regulator [Streptomyces anthocyanicus] >dbj 7812.1e-105
4FHTA Crystal Structure of the PcaV transcriptional regulator from Streptom... 7803.1e-105
WP_003972291.1 MULTISPECIES: winged helix DNA-binding protein [Streptomyces... 7793.7e-105
WP_109028657.1 winged helix DNA-binding protein [Streptomyces rubrogriseus]... 7751.8e-104
WP_115745326.1 winged helix DNA-binding protein [Streptomyces sp. CB09001] ... 7672.5e-103
WP_007389039.1 MULTISPECIES: winged helix DNA-binding protein [Streptomyces... 7672.9e-103
WP_030190445.1 winged helix DNA-binding protein [Streptomyces violaceorubid... 7664.4e-103
WP_104635584.1 winged helix DNA-binding protein [Streptomyces sp. MH60] >gb... 7631.2e-102
WP_153176880.1 winged helix DNA-binding protein [Streptomyces sp. SYP-A7193... 7631.4e-102
WP_226025919.1 winged helix DNA-binding protein [Streptomyces hyderabadensi... 7603.9e-102

PSORT result

LocalizationCertaintyPSORT said
Not Clear