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IDSCO6742 TypeCDS
From1169790 nt length1644
To1168147 aa length547
Gene pI5.26
Definitionputative ABC transporter M.W (Da)59277
NoteSC5F2A.25 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1670 putative ABC transporter ATP-binding protein8610.0e+00
sgrSGR_985 putative ABC transporter ATP-binding protein8930.0e+00
samSAM23877_6392 putative ABC transporter10120.0e+00
scabSCAB13191 putative ABC transporter ATP-binding protein9670.0e+00
saceSACE_7004 ABC transporter, ATP-binding component8300.0e+00
nfarnfa8700 putative ABC transporter ATP-binding protein6450.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran2ABC transporter22-187, 368-496144.03.6e-42

ABC_tran_Xtn1ABC transporter229-33427.61.9e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003972254.1 MULTISPECIES: ATP-binding cassette domain-containing protein... 26100.0e+00
WP_121711847.1 MULTISPECIES: ATP-binding cassette domain-containing protein... 26070.0e+00
WP_106518482.1 ATP-binding cassette domain-containing protein [Streptomyces... 26050.0e+00
WP_093457450.1 MULTISPECIES: ATP-binding cassette domain-containing protein... 26030.0e+00
WP_189285458.1 ATP-binding cassette domain-containing protein [Streptomyces... 25990.0e+00
WP_109028690.1 ATP-binding cassette domain-containing protein [Streptomyces... 25800.0e+00
WP_115745357.1 ATP-binding cassette domain-containing protein [Streptomyces... 25540.0e+00
WP_161380284.1 ATP-binding cassette domain-containing protein [Streptomyces... 25400.0e+00
WP_007390141.1 MULTISPECIES: ATP-binding cassette domain-containing protein... 25390.0e+00
WP_059297170.1 ATP-binding cassette domain-containing protein [Streptomyces... 25380.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear