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IDSCO6770 TypeCDS
From1138465 nt length615
To1137851 aa length204
Gene pI6.89
Definitionputative DNA-binding protein M.W (Da)21647
NoteSC6A5.19 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1644 putative regulatory protein2853.0e-78
sgrSGR_958 putative transcriptional regulator2452.0e-66
samSAM23877_6420 DNA-binding protein3303.0e-117
scabSCAB12891 putative regulatory protein3031.0e-83

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain16-7460.21.6e-16

HTH_31Helix-turn-helix20-7451.66.7e-14

Cupin_21Cupin domain116-18350.89.3e-14

HTH_191Helix-turn-helix domain20-7536.14.6e-09

AraC_binding1AraC-like ligand binding domain128-18125.01.3e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011031170.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7262.4e-95
WP_003972227.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7262.4e-95
WP_189285479.1 helix-turn-helix domain-containing protein [Streptomyces ant... 7252.9e-95
WP_115745380.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7236.8e-95
WP_121715958.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 7192.2e-94
MYS69601.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 7141.3e-93
WP_109028713.1 helix-turn-helix domain-containing protein [Streptomyces rub... 7141.3e-93
WP_164246481.1 helix-turn-helix domain-containing protein [Streptomyces coe... 7141.7e-93
WP_007389117.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 7132.2e-93
WP_153176837.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 7132.2e-93

PSORT result

LocalizationCertaintyPSORT said
Not Clear