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IDSCO6801 TypeCDS
From1105585 nt length903
To1104683 aa length300
Gene pI5.18
Definitionputative LysR-family transcriptional regulator M.W (Da)31318
NoteSC1A2.10 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1626 putative LysR-family transcriptional regulator4408.0e-125
sgrSGR_1442 putative LysR-family transcriptional regulator4662.0e-132
samSAM23877_6436 putative LysR-family transcriptional regulator5480.0e+00
scabSCAB12661 putative LysR-family transcriptional regulator5138.0e-147
saceSACE_6391 LysR-family transcriptional regulator2541.0e-68
nfarnfa3060 putative transcriptional regulator1401.0e-34

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain88-298126.86.4e-37

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family5-6370.57.5e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003972197.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12688.3e-175
WP_109028736.1 LysR family transcriptional regulator [Streptomyces rubrogri... 12652.7e-174
WP_121709340.1 LysR family transcriptional regulator [Streptomyces sp. E5N9... 12513.8e-172
WP_115745427.1 LysR family transcriptional regulator [Streptomyces sp. CB09... 12443.6e-171
WP_164248721.1 LysR family transcriptional regulator [Streptomyces coelicof... 12304.8e-169
WP_059297132.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12288.9e-169
WP_153176825.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 12262.1e-168
WP_104633378.1 LysR family transcriptional regulator [Streptomyces sp. MH60... 12252.7e-168
WP_121701230.1 LysR family transcriptional regulator [Streptomyces sp. E5N2... 12252.9e-168
WP_007389073.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12235.6e-168

PSORT result

LocalizationCertaintyPSORT said
Not Clear