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IDSCO6980 TypeCDS
From919532 nt length1080
To918453 aa length359
GeneiolTB pI8.98
Definitionprobable ABC transport protein membrane component. M.W (Da)37815
NoteSC8F11.06 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7152 myo-inositol ABC transporter permease protein4522.0e-128
samSAM23877_6520 putative ABC transport protein%2C membrane component6560.0e+00
scabSCAB19041 putative myo-inositol ABC transporter permease protein5276.0e-151

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_21Branched-chain amino acid transport system / permease component68-345195.86.6e-58

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU46489.1 ABC transporter permease [Streptomyces sp. SID7813] >gb 16650.0e+00
OWA11434.1 ribose ABC transporter permease [Streptomyces sp. CS113] 16620.0e+00
MZG13079.1 ABC transporter permease [Streptomyces sp. SID5914] 16610.0e+00
WP_161270370.1 MULTISPECIES: ABC transporter permease [Streptomyces] >lcl 16590.0e+00
16580.0e+00
WP_179235354.1 ABC transporter permease [Streptomyces sp. CS113] 16560.0e+00
WP_161376963.1 MULTISPECIES: ABC transporter permease [Streptomyces] >lcl 16550.0e+00
WP_193487212.1 ABC transporter permease [Streptomyces anthocyanicus] >dbj 16550.0e+00
WP_164271538.1 ABC transporter permease [Streptomyces rubrogriseus] >gb 16550.0e+00
WP_030870339.1 MULTISPECIES: ABC transporter permease [Streptomyces] >dbj 16540.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear