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IDSCO7051 TypeCDS
From824798 nt length1248
To826045 aa length415
Gene pI11.18
Definitionputative transcription terminator factor M.W (Da)45249
NoteSC4G1.17c AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1310 putative transcription termination factor5184.0e-148
sgrSGR_6729 putative transcription termination factor5002.0e-142
samSAM23877_1040 transcription termination factor6310.0e+00
scabSCAB83621 putative transcription termination factor5461.0e-156

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ATP-synt_ab1ATP synthase alpha/beta family, nucleotide-binding domain152-35557.81.1e-15

Rho_RNA_bind1Rho termination factor, RNA-binding domain56-12139.05e-10

AAA_251AAA domain161-27733.62.5e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003972093.1 MULTISPECIES: transcription termination factor Rho [Streptom... 18620.0e+00
WP_202493972.1 MULTISPECIES: transcription termination factor Rho [Streptom... 18590.0e+00
WP_193486996.1 MULTISPECIES: transcription termination factor Rho [Streptom... 18550.0e+00
WP_121714958.1 transcription termination factor Rho [Streptomyces sp. E5N91... 18410.0e+00
WP_189284617.1 transcription termination factor Rho [Streptomyces anthocyan... 18330.0e+00
WP_109028827.1 transcription termination factor Rho [Streptomyces rubrogris... 17860.0e+00
AIJ11822.1 Transcription termination factor Rho [Streptomyces lividans TK24]... 17850.0e+00
NEC32336.1 transcription termination factor Rho [Streptomyces rubrogriseus] 17800.0e+00
WP_203695384.1 transcription termination factor Rho [Streptomyces rubrogris... 17800.0e+00
GHC29219.1 transcription termination factor Rho [Streptomyces anthocyanicus... 17790.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear