-- | --

IDSCO7054 TypeCDS
From823324 nt length588
To822737 aa length195
Gene pI7.37
Definitionconserved hypothetical protein M.W (Da)21873
NoteSC4G1.20 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1270 putative PadR-like family transcriptional regulator2031.0e-53
sgrSGR_6631 putative PadR-like family transcriptional regulator1384.0e-34
samSAM23877_1037 putative PadR-like family transcriptional regulator3556.0e-128
scabSCAB88111 putative PadR-like family transcriptional regulator2276.0e-61
saceSACE_3469 PadR-like family transcriptional regulator1792.0e-46
nfarnfa30890 putative transcriptional regulator1991.0e-52

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Vir_act_alpha_C1Virulence activator alpha C-term93-18182.32.7e-23

PadR1Transcriptional regulator PadR-like family7-7948.36.4e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011031405.1 MULTISPECIES: PadR family transcriptional regulator [Strepto... 8474.3e-114
WP_121714954.1 PadR family transcriptional regulator [Streptomyces sp. E5N9... 8441.3e-113
WP_003972090.1 MULTISPECIES: PadR family transcriptional regulator [Strepto... 8431.7e-113
WP_109028829.1 PadR family transcriptional regulator [Streptomyces rubrogri... 8422.1e-113
WP_115745550.1 PadR family transcriptional regulator [Streptomyces sp. CB09... 8343.6e-112
WP_226026794.1 PadR family transcriptional regulator [Streptomyces hyderaba... 8334.8e-112
WP_007446772.1 MULTISPECIES: PadR family transcriptional regulator [Strepto... 8266.9e-111
WP_176155838.1 MULTISPECIES: PadR family transcriptional regulator [unclass... 8258.8e-111
WP_087792230.1 MULTISPECIES: PadR family transcriptional regulator [Strepto... 8259.0e-111
WP_102929756.1 MULTISPECIES: PadR family transcriptional regulator [Strepto... 8259.4e-111

PSORT result

LocalizationCertaintyPSORT said
Not Clear