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IDSCO7270 TypeCDS
From587536 nt length885
To588420 aa length294
Gene pI6.8
Definitionputative transcriptional regulator M.W (Da)31838
NoteSC5H1.22 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1163 putative LysR-family transcriptional regulator4131.0e-116
sgrSGR_1159 putative LysR-family transcriptional regulator2932.0e-80
samSAM23877_0946 putative transcriptional regulator5150.0e+00
scabSCAB85311 putative LysR-family transcriptional regulator4523.0e-128
saceSACE_3079 LysR-family transcriptional regulator2462.0e-66

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain88-290147.92.3e-43

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family3-6276.97.7e-22

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003971873.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13530.0e+00
WP_121715765.1 LysR family transcriptional regulator [Streptomyces sp. E5N9... 13490.0e+00
MYS76170.1 LysR family transcriptional regulator [Streptomyces sp. SID5926] 13470.0e+00
WP_115745614.1 LysR family transcriptional regulator [Streptomyces sp. CB09... 13430.0e+00
WP_164385873.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 13330.0e+00
WP_087811132.1 LysR family transcriptional regulator [Streptomyces sp. CS11... 13210.0e+00
WP_087792344.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13200.0e+00
WP_059297289.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13150.0e+00
WP_121700665.1 LysR family transcriptional regulator [Streptomyces sp. E5N2... 13140.0e+00
WP_030403862.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13130.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear