ID	SCO7278	Type	CDS
From	581221	nt length	888
To	582108	aa length	295
Gene		pI	4.87
Definition	putative RNA polymerase sigma factor	M.W (Da)	32940
Note	SC5H1.14	AseI frg.	A
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4	1	Sigma-70, region 4	237-286	61.9	2.6e-17
	Sigma70_r2	1	Sigma-70 region 2	68-137	60.4	9.5e-17
	Sigma70_r3	1	Sigma-70 region 3	147-206	50.4	1.6e-13
	KORA	1	TrfB plasmid transcriptional repressor	229-283	33.4	3.8e-08
	Sigma70_r4_2	1	Sigma-70, region 4	237-283	32.6	4.2e-08

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_003971865.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1361	0.0e+00
WP_121715753.1	RNA polymerase sigma factor SigF [Streptomyces sp. E5N91]	1346	0.0e+00
WP_109028908.1	RNA polymerase sigma factor SigF [Streptomyces rubrogriseus]...	1343	0.0e+00
WP_115745621.1	RNA polymerase sigma factor SigF [Streptomyces sp. CB09001] ...	1304	2.2e-180
WP_061446289.1	RNA polymerase sigma factor SigF [Streptomyces sp. CCM_MD201...	1278	1.5e-176
WP_133887037.1	RNA polymerase sigma factor SigF [Streptomyces sp. BK208] >l...	1278	1.7e-176
WP_007446700.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1277	2.9e-176
WP_030190505.1	RNA polymerase sigma factor SigF [Streptomyces violaceorubid...	1276	3.1e-176
WP_054100109.1	RNA polymerase sigma factor SigF [Streptomyces coelicoflavus...	1276	3.2e-176
WP_087792350.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1276	3.2e-176

PSORT result

Localization	Certainty	PSORT said
Not Clear

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