-- | --

IDSCO7409 TypeCDS
From442731 nt length951
To443681 aa length316
Gene pI9.55
Definitionputative binding-protein dependent transport protein M.W (Da)34272
NoteSC6D11.05c AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1029 putative multiple sugar ABC transporter permease protein4423.0e-125
samSAM23877_0793 putative binding-protein dependent transport protein5500.0e+00
scabSCAB7351 3292.0e-91
saceSACE_5155 binding-protein-dependent transport permease2411.0e-64

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport system inner membrane component125-30563.81.5e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011031642.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 13470.0e+00
WP_003971734.1 MULTISPECIES: carbohydrate ABC transporter permease [Strepto... 13300.0e+00
WP_121711269.1 carbohydrate ABC transporter permease [Streptomyces sp. E5N9... 13250.0e+00
WP_093457647.1 MULTISPECIES: carbohydrate ABC transporter permease [unclass... 13250.0e+00
WP_115745722.1 carbohydrate ABC transporter permease [Streptomyces sp. CB09... 13220.0e+00
WP_109032179.1 carbohydrate ABC transporter permease [Streptomyces rubrogri... 13210.0e+00
MYS74606.1 ABC transporter permease subunit [Streptomyces sp. SID5926] 13190.0e+00
WP_104632774.1 carbohydrate ABC transporter permease [Streptomyces sp. MH60... 13057.7e-180
WP_189749273.1 carbohydrate ABC transporter permease [Streptomyces tendae] ... 13004.3e-179
WP_087792430.1 carbohydrate ABC transporter permease [Streptomyces sp. CS15... 12996.0e-179

PSORT result

LocalizationCertaintyPSORT said
Not Clear