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IDSCO7579 TypeCDS
From264635 nt length876
To263760 aa length291
Gene pI8.45
Definitionputative DNA binding protein M.W (Da)32620
NoteSC5F1.33 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2175 putative DNA-binding protein4748.0e-135
scabSCAB20421 putative DNA-binding protein5262.0e-150

*avm, Streptomyces avermitilis; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain18-7856.72e-15

HTH_31Helix-turn-helix22-7230.03.6e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003971565.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 15090.0e+00
WP_189284043.1 Scr1 family TA system antitoxin-like transcriptional regulat... 15050.0e+00
WP_109032331.1 Scr1 family TA system antitoxin-like transcriptional regulat... 15040.0e+00
WP_115745877.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14920.0e+00
WP_226027227.1 helix-turn-helix domain-containing protein [Streptomyces hyd... 14800.0e+00
WP_059298761.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14730.0e+00
WP_153181459.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14700.0e+00
WP_104632855.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14690.0e+00
WP_161376909.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 14680.0e+00
WP_007446319.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 14650.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear