-- | --

IDSCO7618 TypeCDS
From222688 nt length795
To221894 aa length264
Gene pI5.97
Definitionputative transcriptional regulator M.W (Da)28205
NoteSC2H2.16 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_6457 putative IclR-family transcriptional regulator2301.0e-61
samSAM23877_7145 putative transcriptional regulator4224.0e-152
scabSCAB80651 putative IclR-family transcriptional regulator3515.0e-98
saceSACE_6572 IclR-family transcriptional regulator2071.0e-54

*sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

IclR1Bacterial transcriptional regulator139-25766.71.6e-18

HTH_IclR1IclR helix-turn-helix domain24-7354.37.5e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU47120.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID7... 12625.0e-175
WP_003971526.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 12466.8e-173
WP_203697267.1 helix-turn-helix domain-containing protein [Streptomyces rub... 12477.6e-173
WP_189284054.1 helix-turn-helix domain-containing protein [Streptomyces ant... 12423.1e-172
WP_193783654.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12399.3e-172
NEC37573.1 helix-turn-helix domain-containing protein [Streptomyces rubrogri... 12399.3e-172
WP_167469566.1 helix-turn-helix domain-containing protein [Streptomyces rub... 12362.9e-171
AXL92744.1 transcriptional regulator [Streptomyces sp. CB09001] 12121.8e-167
WP_162833486.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12024.2e-166
WP_202494076.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 11796.6e-163

PSORT result

LocalizationCertaintyPSORT said
Not Clear