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IDSGR_1055 TypeCDS
From1245576 nt length861
To1244716 aa length286
Gene pI5.99
Definitionputative DNA-binding protein M.W (Da)32270
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6253 putative DNA-binding protein4392.0e-124
coelSCO1979 putative DNA-binding protein4884.0e-139
samSAM23877_2058 DNA-binding protein4645.0e-168
kanCP970_33020 XRE family transcriptional regulator4784.0e-173
scabSCAB69261 putative DNA-binding protein4461.0e-126

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain15-7548.85.8e-13

HTH_31Helix-turn-helix19-6831.61.1e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012378269.1 Scr1 family TA system antitoxin-like transcriptional regulat... 14000.0e+00
WP_003964947.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 13950.0e+00
WP_202549289.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 13950.0e+00
MYR10906.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID7... 13950.0e+00
WP_202463287.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 13920.0e+00
WP_202464837.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13900.0e+00
WP_215110621.1 Scr1 family TA system antitoxin-like transcriptional regulat... 13840.0e+00
NED06210.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID6... 13780.0e+00
WP_030711743.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 13760.0e+00
WP_006128848.1 MULTISPECIES: Scr1 family TA system antitoxin-like transcrip... 13760.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear