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IDSGR_1093 TypeCDS
From1289272 nt length390
To1288883 aa length129
GenerbsD pI4.9
Definitionputative D-ribose ABC transporter auxiliary component M.W (Da)13543
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5316 putative D-ribose ABC transporter permease protein2004.0e-53
coelSCO2749 carbohydrate transport protein.2042.0e-54
samSAM23877_2774 D-ribose pyranase2044.0e-70
kanCP970_09630 D-ribose pyranase2067.0e-71
scabSCAB13241 putative D-ribose ABC transporter permease protein1076.0e-25

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RbsD_FucU1RbsD / FucU transport protein family1-127140.92.8e-41

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003964984.1 MULTISPECIES: D-ribose pyranase [Streptomyces] >sp 5114.5e-65
WP_215109292.1 D-ribose pyranase [Streptomyces sp. McG3] >lcl 4977.8e-63
WP_032777121.1 MULTISPECIES: D-ribose pyranase [Streptomyces] >gb 4942.1e-62
WP_006128786.1 MULTISPECIES: D-ribose pyranase [Streptomyces] >gb 4923.4e-62
WP_216318821.1 D-ribose pyranase [Streptomyces sp. YPW6] >gb 4916.0e-62
WP_137228850.1 D-ribose pyranase [Streptomyces sp. BPSDS2] 4909.1e-62
WP_065476988.1 D-ribose pyranase [Streptomyces sp. PTY087I2] >gb 4909.2e-62
WP_073226748.1 D-ribose pyranase [Streptomyces sp. NBRC 110465] 4899.6e-62
WP_218524081.1 D-ribose pyranase [Streptomyces sp. MW-W600-10] >lcl 4891.1e-61
WP_093812616.1 MULTISPECIES: D-ribose pyranase [Streptomyces] >gb 4881.4e-61

PSORT result

LocalizationCertaintyPSORT said
Not Clear