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IDSGR_1124 TypeCDS
From1325806 nt length894
To1326699 aa length297
Gene pI10.79
Definitionputative LysR-family transcriptional regulator M.W (Da)32102
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1845 putative LysR-family transcriptional regulator3923.0e-110
coelSCO6555 LysR-type transcriptional regulator4192.0e-118
samSAM23877_6255 LysR family transcriptional regulator3946.0e-140
kanCP970_05555 LysR family transcriptional regulator4174.0e-149
scabSCAB16931 putative LysR-family transcriptional regulator4277.0e-121
nfarnfa30710 putative transcriptional regulator2516.0e-68

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain90-27095.03.6e-27

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family9-6672.81.5e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012378319.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12522.0e-172
WP_161183878.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12461.7e-171
WP_003965018.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 12442.9e-171
WP_030700543.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12426.0e-171
WP_179889172.1 LysR family transcriptional regulator [Streptomyces sp. f51] 12151.3e-166
WP_087764309.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 12122.1e-166
WP_073869020.1 LysR family transcriptional regulator [Streptomyces sp. CB00... 12113.1e-166
WP_047179708.1 LysR family transcriptional regulator [Streptomyces sp. MNU7... 12095.6e-166
WP_097933482.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 12071.2e-165
WP_097922318.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 12052.9e-165

PSORT result

LocalizationCertaintyPSORT said
Not Clear