| ID | SGR_1364
| Type | CDS
|
| From | 1598900
| nt length | 1743
|
| To | 1597158
| aa length | 580
|
| Gene | poxB
| pI | 6.76
|
| Definition | putative pyruvate dehydrogenase
| M.W (Da) | 62801
|
| Note |
| AseI frg. | A
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_2079 putative pyruvate dehydrogenase/oxidase FAD and thiamine PPi cofactors | 1050 | 0.0e+00
|
| coel | SCO6155 pyruvate dehydrogenase | 1028 | 0.0e+00
|
| sam | SAM23877_5870 pyruvate dehydrogenase (pyruvate oxidase)%2C thiamin-dependent%2C FAD-binding | 1010 | 0.0e+00
|
| kan | CP970_09090 pyruvate dehydrogenase | 1071 | 0.0e+00
|
| scab | SCAB17191 putative pyruvate dehydrogenase/oxidase FAD and thiamine PPi cofactors | 299 | 9.0e-82
|
| sace | SACE_1218 pyruvate dehydrogenase | 769 | 0.0e+00
|
| nfar | nfa1510 putative pyruvate oxidase | 255 | 7.0e-69
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| TPP_enzyme_N | 1 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 5-171 | 146.1 | 6.7e-43
|
| TPP_enzyme_C | 1 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 383-529 | 141.4 | 1.7e-41
|
| TPP_enzyme_M | 1 | Thiamine pyrophosphate enzyme, central domain | 192-320 | 104.5 | 3.3e-30
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|