-- | --

IDSGR_1381 TypeCDS
From1616057 nt length933
To1615125 aa length310
Gene pI8.28
Definitionputative LysR-family transcriptional regulator M.W (Da)33280
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0089 putative transcriptional regulator1595.0e-40
samSAM23877_6565 putative LysR family transcriptional regulatory protein4814.0e-174
scabSCAB6641 1832.0e-47
saceSACE_4009 transcriptional regulator, LysR family4123.0e-116
nfarnfa35200 putative transcriptional regulator2123.0e-56

*coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain88-293159.94.9e-47

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family3-6279.89.2e-23

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003965422.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 14260.0e+00
WP_219204982.1 LysR family transcriptional regulator [Streptomyces griseus]... 14210.0e+00
WP_202463713.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 14140.0e+00
GGY41972.1 LysR family transcriptional regulator [Streptomyces anulatus] 13650.0e+00
WP_047179470.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 13530.0e+00
WP_219612811.1 LysR family transcriptional regulator [Streptomyces anulatus... 13520.0e+00
WP_097871614.1 LysR family transcriptional regulator [Streptomyces sp. rh34... 13510.0e+00
GHF53357.1 LysR family transcriptional regulator [Streptomyces griseus] 13500.0e+00
WP_097964773.1 LysR family transcriptional regulator [Streptomyces sp. or20... 13500.0e+00
WP_217223895.1 LysR family transcriptional regulator [Streptomyces anulatus... 13490.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear