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IDSGR_1389 TypeCDS
From1623857 nt length1296
To1625152 aa length431
Gene pI9.5
Definitionputative transcriptional regulator M.W (Da)45927
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2124 putative regulatory protein4002.0e-112
coelSCO6105 putative regulatory protein4123.0e-116
samSAM23877_5824 Regulatory protein4141.0e-143
kanCP970_09265 GAF domain-containing protein4327.0e-151
scabSCAB19741 putative regulatory protein4042.0e-113
saceSACE_4759 regulatory protein3471.0e-96
nfarnfa29470 putative transcriptional regulator2592.0e-70

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GAF1GAF domain105-21939.09.8e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
SED54828.1 GAF domain-containing protein [Streptomyces griseus] >emb 21550.0e+00
WP_012378493.1 MULTISPECIES: GAF domain-containing protein [Streptomyces] >... 21530.0e+00
WP_161185448.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 21440.0e+00
SCD58786.1 GAF domain-containing protein [Streptomyces sp. OspMP-M43] 21350.0e+00
WP_030703795.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 21350.0e+00
EGE40998.1 transcriptional regulator domain-containing protein [Streptomyces... 21350.0e+00
WP_219204986.1 GAF domain-containing protein, partial [Streptomyces griseus... 20310.0e+00
WP_215101629.1 GAF domain-containing protein [Streptomyces sp. McG3] >lcl 20310.0e+00
WP_047179462.1 GAF domain-containing protein [Streptomyces sp. MNU77] >gb 19580.0e+00
WP_164622029.1 GAF domain-containing protein [Streptomyces sp. SID14515] >g... 19330.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear