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IDSGR_1413 TypeCDS
From1650896 nt length1299
To1649598 aa length432
Gene pI5.32
Definitionputative ABC transporter substrate-binding protein M.W (Da)46268
Note AseI frg.A
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2143 putative ABC transporter solute-binding protein6009.0e-173
coelSCO6088 putative solute-binding transport protein6360.0e+00
samSAM23877_5806 putative lipoprotein in oleD 5'region6260.0e+00
kanCP970_09420 sugar ABC transporter substrate-binding protein6220.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SBP_bac_11Bacterial extracellular solute-binding protein54-339136.71.5e-39

SBP_bac_81Bacterial extracellular solute-binding protein55-36196.42.4e-27

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012378509.1 MULTISPECIES: extracellular solute-binding protein [Streptom... 20790.0e+00
WP_161184912.1 extracellular solute-binding protein [Streptomyces sp. SID72... 20710.0e+00
WP_164364350.1 extracellular solute-binding protein [Streptomyces griseus] ... 20690.0e+00
WP_093684611.1 MULTISPECIES: extracellular solute-binding protein [unclassi... 20640.0e+00
WP_003965455.1 MULTISPECIES: extracellular solute-binding protein [Streptom... 20510.0e+00
WP_087764483.1 sugar ABC transporter substrate-binding protein [Streptomyce... 19890.0e+00
WP_073803896.1 MULTISPECIES: sugar ABC transporter substrate-binding protei... 19850.0e+00
WP_164220735.1 sugar ABC transporter substrate-binding protein [Streptomyce... 19840.0e+00
WP_097924408.1 MULTISPECIES: sugar ABC transporter substrate-binding protei... 19820.0e+00
WP_073869319.1 MULTISPECIES: sugar ABC transporter substrate-binding protei... 19810.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear