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IDSGR_1476 TypeCDS
From1721714 nt length1272
To1722985 aa length423
Genernd pI4.93
Definitionputative ribonuclease D M.W (Da)45483
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2231 putative ribonuclease D5871.0e-168
coelSCO6028 hypothetical protein6076.0e-175
samSAM23877_5746 Ribonuclease D5350.0e+00
kanCP970_10040 ribonuclease D6490.0e+00
scabSCAB20891 putative ribonuclease D6124.0e-176
saceSACE_1832 putative ribonuclease D (partial match)3702.0e-103
nfarnfa37400 putative RNase D3717.0e-104

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_pol_A_exo113'-5' exonuclease42-205119.01.6e-34

HRDC1HRDC domain247-31349.23.6e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_205084813.1 ribonuclease D [Streptomyces sp. RHZ10] >lcl 15800.0e+00
WP_097976003.1 ribonuclease D [Streptomyces sp. gb14] >gb 15790.0e+00
WP_078863057.1 ribonuclease D [Streptomyces sp. JS01] 15770.0e+00
WP_078567016.1 ribonuclease D [Streptomyces sp. CNS654] 15770.0e+00
WP_030709842.1 MULTISPECIES: ribonuclease D [Streptomyces] >lcl 15760.0e+00
WP_078654687.1 MULTISPECIES: ribonuclease D [Streptomyces] >gb 15750.0e+00
WP_097884320.1 MULTISPECIES: ribonuclease D [unclassified Streptomyces] >lc... 15740.0e+00
WP_089116931.1 MULTISPECIES: ribonuclease D [unclassified Streptomyces] >lc... 15740.0e+00
WP_073822919.1 MULTISPECIES: ribonuclease D [Streptomyces] 15740.0e+00
WP_075263669.1 ribonuclease D [Streptomyces sp. Tue 6075] 15720.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear