-- | --

IDSGR_1562 TypeCDS
From1834720 nt length402
To1834319 aa length133
Gene pI6.34
Definitionputative endoribonuclease M.W (Da)13819
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2305 hypothetical protein1891.0e-49
coelSCO5985 conserved hypothetical protein1974.0e-52
samSAM23877_5699 hypothetical protein2003.0e-68
kanCP970_10305 RidA family protein2211.0e-76
scabSCAB87891 putative endoribonuclease1252.0e-30
saceSACE_3136 putative endoribonuclease, translation initiation1444.0e-36
nfarnfa12420 putative endoribonuclease1342.0e-33

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribonuc_L-PSP1Endoribonuclease L-PSP12-13165.44.1e-18

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003965612.1 MULTISPECIES: RidA family protein [Streptomyces] >gb 6765.3e-90
WP_097867020.1 MULTISPECIES: RidA family protein [unclassified Streptomyces... 6522.2e-86
WP_030079854.1 MULTISPECIES: RidA family protein [Streptomyces] >lcl 6505.1e-86
WP_205081989.1 RidA family protein [Streptomyces sp. RHZ10] >lcl 6497.0e-86
WP_030577659.1 MULTISPECIES: RidA family protein [Streptomyces] >gb 6487.3e-86
WP_050357046.1 MULTISPECIES: RidA family protein [Streptomyces] >gb 6487.8e-86
WP_096629472.1 RidA family protein [Streptomyces sp. WZ.A104] >gb 6489.8e-86
WP_069736905.1 MULTISPECIES: RidA family protein [Streptomyces] >dbj 6481.0e-85
QCW79777.1 RidA family protein [Streptomyces sp. S6] 6461.7e-85
WP_127469161.1 RidA family protein [Streptomyces sp. B27] 6461.7e-85

PSORT result

LocalizationCertaintyPSORT said
Not Clear