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IDSGR_1642 TypeCDS
From1935511 nt length1407
To1934105 aa length468
Gene pI8.95
Definitionputative DNA-binding protein M.W (Da)51702
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2042 putative DNA-binding protein7410.0e+00
coelSCO0981 putative DNA-binding protein7610.0e+00
kanCP970_01980 XRE family transcriptional regulator4678.0e-163
nfarnfa52530 putative DNA-binding protein5154.0e-147

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); kan, Streptomyces kanamyceticus ATCC 12853; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF20831Predicted transcriptional regulator (DUF2083)305-461240.37.1e-72

DUF9551Domain of unknown function (DUF955)192-30474.94.6e-21

HTH_311Helix-turn-helix domain7-6149.63.4e-13

HTH_31Helix-turn-helix10-6345.17.1e-12

HTH_191Helix-turn-helix domain7-6143.72e-11

HTH_261Cro/C1-type HTH DNA-binding domain9-6227.43e-06

HTH_251Helix-turn-helix domain9-4126.73.4e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012378687.1 helix-turn-helix transcriptional regulator [Streptomyces gri... 23750.0e+00
MYR16221.1 DUF2083 domain-containing protein [Streptomyces sp. SID724] 23560.0e+00
WP_202549508.1 XRE family transcriptional regulator [Streptomyces sp. SID78... 22860.0e+00
NEB54922.1 DUF2083 domain-containing protein [Streptomyces griseus] 22710.0e+00
WP_202465611.1 XRE family transcriptional regulator [Streptomyces sp. SID72... 22650.0e+00
WP_015036751.1 helix-turn-helix transcriptional regulator [Streptomyces ven... 22600.0e+00
WP_189805036.1 helix-turn-helix transcriptional regulator [Streptomyces tan... 22500.0e+00
WP_003965684.1 MULTISPECIES: XRE family transcriptional regulator [unclassi... 22480.0e+00
WP_087764640.1 XRE family transcriptional regulator [Streptomyces sp. CS057... 22240.0e+00
WP_073224058.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 22230.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear